CDS

Accession Number TCMCG007C11293
gbkey CDS
Protein Id XP_009126159.1
Location join(3218152..3218250,3218488..3218604,3219071..3219163,3219250..3219321,3219475..3219582,3219654..3219736,3219859..3219997,3220114..3220182,3220265..3220342,3220497..3220559,3220653..3220697,3220807..3220914,3221044..3221142,3221283..3221486,3221593..3221652,3221866..3221976,3222181..3222278,3222415..3222523,3222762..3222827,3222916..3223014,3223093..3223173,3223248..3223337,3223489..3223574,3223670..3223750,3223845..3224027,3224189..3224255,3224374..3224484,3224605..3224712,3224797..3224934,3225029..3225166,3225278..3225382,3225466..3225588)
Gene LOC103851080
GeneID 103851080
Organism Brassica rapa

Protein

Length 1076aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009127911.3
Definition protein EXPORTIN 1A isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category UY
Description ribosomal small subunit export from nucleus
KEGG_TC 1.I.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14290        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000054        [VIEW IN EMBL-EBI]
GO:0000055        [VIEW IN EMBL-EBI]
GO:0000056        [VIEW IN EMBL-EBI]
GO:0000122        [VIEW IN EMBL-EBI]
GO:0000775        [VIEW IN EMBL-EBI]
GO:0000776        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005049        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033157        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046822        [VIEW IN EMBL-EBI]
GO:0046825        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0140104        [VIEW IN EMBL-EBI]
GO:0140142        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCCGAGAAGCTAAGAGACTTGAGCCAGCCGATTGACGTCGGCGTGCTCGATGCCACCGTCGCAGCCTTCTTCGTCACCGGATCTAAGGAGGAGAGAGCTGCTGCGGATCAGATTCTTCGGGATTTGCAAGCTAATCCGGATATGTGGCTTCAGGTTGTTCACATTCTACAGAACACAAAGAGCATGGACACCAAGTTCTTTGCCCTTCAGGTTCTAGAAGGTGTTATTAAGTATAGATGGAATGCGCTGCCTGTTGAACAACGGGATGGAATGAAAAATTACATCTCGGAGGTCATTGTAACGCTCTCGGGTAATGAAGCGTCTTTCAGATCGGAAAGGCTCTATGTCAACAAACTAAACGTTATCTTGGTTCAGATAGTGAAGCATGATTGGCCGGCAAAGTGGACAAGCTTCATTCCCGATCTAGTTGCCGCTGCTAAAACTAGCGAAACCATCTGCGAAAATTGCATGATCATTTTGAAACTCCTAAGCGAAGAGGTTTTTGATTTCTCAAGAGGAGAAATGACTCAGCAGAAGATTAAAGAGCTGAAACAATCTCTAAACAGCGAGTTTAAACTCATTCACGAGTTATGCCTATATGTCCTCTCAGCATCTCAAAGACAGGATCTTATACGTTCAACACTGTCTGCGTTGCATGCCTATCTATCTTGGATTCCGTTGGGCTATATTTTTGAGTCTCCTTTGCTTGAGACCCTCCTTAGATTCTTTCCTGTGCCAGCATATAGAAATCTCACACTTCAATGTCTAACTGAGGTTGCAGCTCTCAATTTCGGAGACTTCTACAATATCCAATATGTCAAGATGTACACCGTATTCATAGGGCAGCTGCAGACAATTCTCCCACCGAGTACAAATATCCCAGAGGCATATTCAAACGGAAGTGATGAAGAACAAGCATTTATCCAGAACCTGGCACTATTTTTTACTTCGTTTTTCAAGTTTCATATACGAGTCCTGGAATCAGCTCCAGATATTGTCGCCTTATTACTTACGGGTCTCGAATATCTCATCAATATATCATATGTTGATGACACTGAAGTTTTTAAGGTTTGTTTAGACTACTGGAACTCATTGGTTCTGGAGCTGTTTGATGCACATCATAATTCGGATAACCCTGCAGCAAATGCAAATCTGATGGGATTACAGATGTCTTTCATTCCTGGTATGGTTGATGGCCTTGGTTCGCAAGTCATGCAGCGGCGTCAACTTTACTCGAACCCTATGTCCAAGCTAAGAGGGTTAATGATTAGCCGTATGGCGAAGCCTGAAGAAGTGCTTATTGTTGAAGATGAAAATGGGAACATCGTCCGTGAAACTATGAAGGACAATGATGTTCTTGTTCAGTACAAGATAATGCGGGAGACATTAATCTACCTGTCACACCTTGATCACGATGACACTGAGAAGCAGATGTTGAAGAAGCTAAACAAACAATTAAGCGGGGAGGAATGGGCATGGAACAATTTGAATACATTGTGCTGGGCTATTGGGTCTATTTCTGGATCTATGGCAGAAGATCAGGAAAATAGATTTTTGGTGATGGTTATTCGTGATTTGTTGAATTTATGTGAGATTACCAAGGGAAAAGACAATAAAGCTGTCATTGCTAGCAACATTATGTATGTCGTTGGCCAGTATCCGAGGTTCTTAAGGGCCCATTGGAAGTTTTTGAAGACAGTTGTGAATAAGCTGTTTGAATTCATGCACGAGACACATCCTGGTGTTCAGGACATGGCCTGTGATACATTCCTGAAAATAGTGCAGAAGTGCAAGCGTAAATTTGTTATTGTCCAGGTTGGAGAGCATGAACCATTTGTATCTGAACTTCTGTCTGGCCTTGCAACAACTGTTCAAGATCTTGAGCCTCATCAAATTCACTCATTTTATGAATCTGTTGGTAATATGATCCAAGCAGAATCAGATCCTCAGAAGAGAGATGAATATCTACAGAGGTTGATGGCACTCCCAAACCAGAAATGGGCAGAAATCATAGGACAAGCACGCCAGAGTGTAGAATTCCTCAAGGATCCAGATGTGATACGCACAGTGCTTAATATCCTGCAGACAAACACTAGTGCTGCTACTTCACTAGGAACGTACTTCTTATCCCAAATTTCCTTGATATTCTTGGATATGTTGAATGTGTACAGAATGTACAGTGAGCTTGTGTCAACCAGCATTACTAGTGGGGGACCATATGCCTCCAAGACATCTTTTGTAAAACTCTTAAGATCTGTCAAGAGGGAAACCCTTAAGCTGATTGAAACCTTTTTAGACAAAGCTGAAGACCAATCACACATAGGGAAACAGTTTGTGCCTCCAATGATGGAATCTGTACTCTGTGACTACGCGAGGAATGTGCCTGATGCTAGGGAATCAGAAGTTCTTTCACTTTTTGCAACGATTATAAACAAGTACAAGGGGACAATGTTGGATGACGTGCCAAACATATTTGAAGCTGTTTTCCAGTGTACGTTGGAGATGATAACTAAGAACTTCGAAGATTATCCAGAACACCGCCTCAAGTTTTTCTCATTACTCCGTGCTATTGCTACATTTTGCTTCCCTGCCTTGATAAAGTTGTCAAGTCAGCAACTGAAGCTAGTGATGGATTCAATCATCTGGGCATTTAGACATACCGAGAGAAATATCGCTGAAACTGGGCTTAATCTATTGCTTGAGATGCTGAAGAACTTCCAGCAATCTGCGTTTTGTAATCAATTCTTCCGTTCTTACTTTATACAAATCGAGCAAGAAATATTTGCTGTTTTGACTGATACCTTTCATAAGCCTGGTTTCAAGCTGCATGTGTTGGTGCTGCAGCATCTGTTTTGCCTGGTTGAGAGCGGTTCTTTGACGGAACCTTTGTGGGATGCTGCAACGGTACCGTACCCGTATCCGAACAACGCTGCGTTTGTTCGTGAATACACAATTAAGCTATTGAGTTCTTCTTTCCCCAACATGACTGCAGCAGAGGTCACACAGTTTGTGAATGGACTTTACGAGTCAAGAAATGACCCTTCTGAATTTAAGAAAAACATTCGTGACTTCCTTGTACAATCCAAGGAATTCTCCGCTCAGGATAACAAAGACCTCTACGCCGAGGAAGCTGCTGCGCAGAGAGAGCAAGAGCGTCAAAGGATGCTTTCGATTCCTGGTCTTGTTGCTCCTAATGAGATTCAAGACGAGATGGTAGACTCCTAA
Protein:  
MAAEKLRDLSQPIDVGVLDATVAAFFVTGSKEERAAADQILRDLQANPDMWLQVVHILQNTKSMDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVTLSGNEASFRSERLYVNKLNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMIILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRSTLSALHAYLSWIPLGYIFESPLLETLLRFFPVPAYRNLTLQCLTEVAALNFGDFYNIQYVKMYTVFIGQLQTILPPSTNIPEAYSNGSDEEQAFIQNLALFFTSFFKFHIRVLESAPDIVALLLTGLEYLINISYVDDTEVFKVCLDYWNSLVLELFDAHHNSDNPAANANLMGLQMSFIPGMVDGLGSQVMQRRQLYSNPMSKLRGLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLKKLNKQLSGEEWAWNNLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGEHEPFVSELLSGLATTVQDLEPHQIHSFYESVGNMIQAESDPQKRDEYLQRLMALPNQKWAEIIGQARQSVEFLKDPDVIRTVLNILQTNTSAATSLGTYFLSQISLIFLDMLNVYRMYSELVSTSITSGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQSHIGKQFVPPMMESVLCDYARNVPDARESEVLSLFATIINKYKGTMLDDVPNIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATFCFPALIKLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQQSAFCNQFFRSYFIQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGSLTEPLWDAATVPYPYPNNAAFVREYTIKLLSSSFPNMTAAEVTQFVNGLYESRNDPSEFKKNIRDFLVQSKEFSAQDNKDLYAEEAAAQREQERQRMLSIPGLVAPNEIQDEMVDS